ncRNA ID | gra-miR8720 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr12:1723978-1724102 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 92 - CAGUGUAGUUCUAAACCCGUCGGG - 115 |
Stem-loop(if miRNA) |
-          CA              CC          -  -   CAC   C   --A    G  ACCUUGCGCG  GUGUAGUUCUAAAC  GUCGGGGUUG GG GUA   CUG ACG   CGUG G  ||||||||||  ||||||||||||||  |||||||||| || |||   ||| |||   ||||  UGGAACGCGC  CACAUUAAGAUUUG  UAGCUCCAAC CC CAU   GAC UGU   GCAC A A          AC              AU          G  A   CAA   C   AAA    A |
Stem-loop sequence | ACCUUGCGCGCAGUGUAGUUCUAAACCCGUCGGGGUUGGGGUACACCUGCACGACGUGGGAACACGAAAUGUCCAGAACUACACCGCAACCUCGAUUAGUUUAGAAUUACACCACGCGCAAGGUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |