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BaseInfo

ncRNA ID gra-miR8720
Species Gossypium raimondii
Class miRNA
Genome position chr12:1723978-1724102 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 92 - CAGUGUAGUUCUAAACCCGUCGGG - 115
Stem-loop(if miRNA) -          CA              CC          -  -   CAC   C   --A    G
 ACCUUGCGCG  GUGUAGUUCUAAAC  GUCGGGGUUG GG GUA   CUG ACG   CGUG G
 ||||||||||  ||||||||||||||  |||||||||| || |||   ||| |||   ||||
 UGGAACGCGC  CACAUUAAGAUUUG  UAGCUCCAAC CC CAU   GAC UGU   GCAC A
A          AC              AU          G  A   CAA   C   AAA    A
Stem-loop sequence ACCUUGCGCGCAGUGUAGUUCUAAACCCGUCGGGGUUGGGGUACACCUGCACGACGUGGGAACACGAAAUGUCCAGAACUACACCGCAACCUCGAUUAGUUUAGAAUUACACCACGCGCAAGGUA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).