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BaseInfo

ncRNA ID gra-miR8672
Species Gossypium raimondii
Class miRNA
Genome position chr11:62009473-62009687 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - AAGAGAAAUGAUUGUAUGAAACAG - 34
Stem-loop(if miRNA) UAGGUAAA         AU               A     UAUUAUUUUUUAAUAAUUUUAUGUCACAUCAAUAAUUUAAUCCUGAAUUUCAGGAUUUUAAUUUGGAU
        GAAAGAGAA  GAUUGUAUGAAACAG UAUAU                                                                    U
        |||||||||  ||||||||||||||| |||||
        CUUUUUUUU  CUAAUAUACUUUGUC ACUGC                                                                    U
UAAAGAGA         --               -     AGUGCAGUAGAUAUAGAGAAAAAGAUUAUCGAAAUACGAUGUAGUUGUAAAAAUAGAAUUUUUUUAAA
Stem-loop sequence UAGGUAAAGAAAGAGAAAUGAUUGUAUGAAACAGAUAUAUUAUUAUUUUUUAAUAAUUUUAUGUCACAUCAAUAAUUUAAUCCUGAAUUUCAGGAUUUUAAUUUGGAUUUAAAUUUUUUUAAGAUAAAAAUGUUGAUGUAGCAUAAAGCUAUUAGAAAAAGAGAUAUAGAUGACGUGACGUCACUGUUUCAUAUAAUCUUUUUUUUCAGAGAAAU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).