| ncRNA ID | gra-miR8653b |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr11:60619169-60619404 [-] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - UUCAAACUUAUUUUACGGCCA - 31 |
| Stem-loop(if miRNA) |
U - C A AA UA CG GU CUAUUACACUGGCCGUAAAAUAAGUU GAA AAUUUUGAGGUGUUCCAAGG GAUGGGAUGGUCUC CCUUCCAUAACA UAUACAUCUCC GAGUAGUAGAACAUUAGUU U |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| C GAUAAUGUGACCGGCAUUUUAUUCAA CUU UUAAAACUCCACAAGGUUCC CUACUCUACCAGAG GGAAGGUAUUGU AUAUGUAGAGG CUCAUCAUCUUGUAAUCAA G C A A C CC UC AU GU |
| Stem-loop sequence | UCUAUUACACUGGCCGUAAAAUAAGUUGAACAAUUUUGAGGUGUUCCAAGGAGAUGGGAUGGUCUCAACCUUCCAUAACAUAUAUACAUCUCCCGGAGUAGUAGAACAUUAGUUGUUCGUGAACUAAUGUUCUACUACUCUAGGAGAUGUAUACUUGUUAUGGAAGGCCGAGACCAUCUCAUCCCCUUGGAACACCUCAAAAUUAUUCAAACUUAUUUUACGGCCAGUGUAAUAGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012617983.1 |
|
3.0 | PREDICTED: Gossypium raimondii protein MITOFERRINLIKE 1, chloroplastic-like (LOC105790407), mRNA | protein MITOFERRINLIKE 1, chloroplastic-like(LOC105790407) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |