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BaseInfo

ncRNA ID gra-miR8639c
Species Gossypium raimondii
Class miRNA
Genome position chr11:56636474-56636675 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - UAAACAUAAGUAGAAUUAAACAAG - 34
Stem-loop(if miRNA) G                                                 -GA   --AU      UUUGUUUUUGUCUAAAUUUUUUUAUAUUUUUCAAAU
 UAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAAUUCUUUUAAGU   CAA    AUGGAA                                    A
 |||||||||||||||||||||||||||||||||||||||||||||||||   |||    ||||||
 AUUACCUUCUGAACAAAUUAAGAUGAAUACAAAUUGUUGAGAAAGUUCG   GUU    AUGAUU                                    A
-                                                 AAG   AUAU      GGUCUAAAAUCAUUACUUUGACUGAAAAUAUAAAUU
Stem-loop sequence GUAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAAUUCUUUUAAGUGACAAAUAUGGAAUUUGUUUUUGUCUAAAUUUUUUUAUAUUUUUCAAAUAAUUAAAUAUAAAAGUCAGUUUCAUUACUAAAAUCUGGUUAGUAUAUAUUGGAAGCUUGAAAGAGUUGUUAAACAUAAGUAGAAUUAAACAAGUCUUCCAUUA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).