ncRNA ID | gra-miR8639c |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr11:56636474-56636675 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - UAAACAUAAGUAGAAUUAAACAAG - 34 |
Stem-loop(if miRNA) |
G                                                 -GA   --AU      UUUGUUUUUGUCUAAAUUUUUUUAUAUUUUUCAAAU  UAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAAUUCUUUUAAGU   CAA    AUGGAA                                    A  |||||||||||||||||||||||||||||||||||||||||||||||||   |||    ||||||  AUUACCUUCUGAACAAAUUAAGAUGAAUACAAAUUGUUGAGAAAGUUCG   GUU    AUGAUU                                    A -                                                 AAG   AUAU      GGUCUAAAAUCAUUACUUUGACUGAAAAUAUAAAUU |
Stem-loop sequence | GUAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAAUUCUUUUAAGUGACAAAUAUGGAAUUUGUUUUUGUCUAAAUUUUUUUAUAUUUUUCAAAUAAUUAAAUAUAAAAGUCAGUUUCAUUACUAAAAUCUGGUUAGUAUAUAUUGGAAGCUUGAAAGAGUUGUUAAACAUAAGUAGAAUUAAACAAGUCUUCCAUUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |