ncRNA ID | gra-miR8639b |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr11:56636473-56636674 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 169 - UAAACAUAAGUAGAAUUAAACAAG - 192 |
Stem-loop(if miRNA) |
G                                      C     C   CUUCCAAUAUAUA    C  GAUUUUAGUAAUGAAACUGACUUUUAUAUUUAAUUAU  UAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAA UCUUU AAG             CUAA CA                                     U  |||||||||||||||||||||||||||||||||||||| ||||| |||             |||| ||                                     U  AUUACCUUCUGAACAAAUUAAGAUGAAUACAAAUUGUU AGAAA UUC             UGUU UA                                     G -                                      A     A   -----------AC    -  UACCUUAAACAAAAACAGAUUUAAAAAAAUAUAAAAA |
Stem-loop sequence | GUAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAACUCUUUCAAGCUUCCAAUAUAUACUAACCAGAUUUUAGUAAUGAAACUGACUUUUAUAUUUAAUUAUUUGAAAAAUAUAAAAAAAUUUAGACAAAAACAAAUUCCAUAUUUGUCACUUAAAAGAAUUGUUAAACAUAAGUAGAAUUAAACAAGUCUUCCAUUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |