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BaseInfo

ncRNA ID gra-miR8639b
Species Gossypium raimondii
Class miRNA
Genome position chr11:56636473-56636674 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 169 - UAAACAUAAGUAGAAUUAAACAAG - 192
Stem-loop(if miRNA) G                                      C     C   CUUCCAAUAUAUA    C  GAUUUUAGUAAUGAAACUGACUUUUAUAUUUAAUUAU
 UAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAA UCUUU AAG             CUAA CA                                     U
 |||||||||||||||||||||||||||||||||||||| ||||| |||             |||| ||                                     U
 AUUACCUUCUGAACAAAUUAAGAUGAAUACAAAUUGUU AGAAA UUC             UGUU UA                                     G
-                                      A     A   -----------AC    -  UACCUUAAACAAAAACAGAUUUAAAAAAAUAUAAAAA
Stem-loop sequence GUAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAACUCUUUCAAGCUUCCAAUAUAUACUAACCAGAUUUUAGUAAUGAAACUGACUUUUAUAUUUAAUUAUUUGAAAAAUAUAAAAAAAUUUAGACAAAAACAAAUUCCAUAUUUGUCACUUAAAAGAAUUGUUAAACAUAAGUAGAAUUAAACAAGUCUUCCAUUA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).