ncRNA ID | gra-miR827b |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr11:55877977-55878115 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - UUUGUUUAUGGUCAUCUAAGC - 31 |
Stem-loop(if miRNA) |
GU    UG        U              --       ------CAUCUCG    UUCUUUGUUCAAGCA   UGAA  UGUUUGUU AUGGUCAUCUAAGC  CAUUUUU             CCAA               G   ||||  |||||||| ||||||||||||||  |||||||             ||||               U   ACUU  ACAAACAA UACCAGUAGAUUUG  GUAAAGG             UAGC               U CU    CA        C              UA       CGCCCACAUAAGA    CAAGCUAAUAGGUUU |
Stem-loop sequence | GUUGAAUGUGUUUGUUUAUGGUCAUCUAAGCCAUUUUUCAUCUCGCCAAUUCUUUGUUCAAGCAGUUUUUGGAUAAUCGAACCGAUAGAAUACACCCGCGGAAAUGAUGUUUAGAUGACCAUCAACAAACAACUUCAUC |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |