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BaseInfo

ncRNA ID gra-miR8734
Species Gossypium raimondii
Class miRNA
Genome position chr11:55070142-55070317 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - GAUCAUAUCUCGUACGUUAGGACA - 34
Stem-loop(if miRNA) UCUA    AUUACUG            -     AU   A     GAAGAGAA   -  A   C -- UCCCUUUUUGUAUUAGGACAUUACUUAA
    GUAG       AUGUCUUAGUGU CGAGA  UGA UAUUU        UUU AA ACA G  A                            C
    ||||       |||||||||||| |||||  ||| |||||        ||| || ||| |  |
    CGUC       UACAGGAUUGCA GCUCU  ACU GUAAA        AGU AA UUG A  U                            U
AUUC    ------A            U     AU   A     ----GAAG   U  -   - AC UUAUUCGAGAGAAGCACUUUUGAUUAAA
Stem-loop sequence UCUAGUAGAUUACUGAUGUCUUAGUGUCGAGAAUUGAAUAUUUGAAGAGAAUUUAAAACACGAUCCCUUUUUGUAUUAGGACAUUACUUAACUAAAUUAGUUUUCACGAAGAGAGCUUAUUUCAAGUUAAUUGAGAAGAAAUGAUCAUAUCUCGUACGUUAGGACAUACUGCCUUA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).