ncRNA ID | gra-miR8734 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr11:55070142-55070317 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - GAUCAUAUCUCGUACGUUAGGACA - 34 |
Stem-loop(if miRNA) |
UCUA    AUUACUG            -     AU   A     GAAGAGAA   -  A   C -- UCCCUUUUUGUAUUAGGACAUUACUUAA     GUAG       AUGUCUUAGUGU CGAGA  UGA UAUUU        UUU AA ACA G  A                            C     ||||       |||||||||||| |||||  ||| |||||        ||| || ||| |  |     CGUC       UACAGGAUUGCA GCUCU  ACU GUAAA        AGU AA UUG A  U                            U AUUC    ------A            U     AU   A     ----GAAG   U  -   - AC UUAUUCGAGAGAAGCACUUUUGAUUAAA |
Stem-loop sequence | UCUAGUAGAUUACUGAUGUCUUAGUGUCGAGAAUUGAAUAUUUGAAGAGAAUUUAAAACACGAUCCCUUUUUGUAUUAGGACAUUACUUAACUAAAUUAGUUUUCACGAAGAGAGCUUAUUUCAAGUUAAUUGAGAAGAAAUGAUCAUAUCUCGUACGUUAGGACAUACUGCCUUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |