| ncRNA ID | gra-miR8742a |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr11:53348537-53348666 [+] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 100 - UAUCUUAUUCAUCUUGGACUG - 120 |
| Stem-loop(if miRNA) |
A A -------------A U AAAACAGUUGAGGA GGAAUGUUC CAGUCCAAGAUGAAUAAGAUAGCU UUCA GCU G ||||||||| |||||||||||||||||||||||| |||| ||| CCUUACAAG GUCAGGUUCUACUUAUUCUAUCGA UCAU AUG G - G CAAAAUCGACAAAA G UAGCACAUAAAUGA |
| Stem-loop sequence | AGGAAUGUUCACAGUCCAAGAUGAAUAAGAUAGCUAUUCAUGCUAAAACAGUUGAGGAGGAGUAAAUACACGAUGUAGUACUAAAACAGCUAAAACAGCUAUCUUAUUCAUCUUGGACUGGGAACAUUCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012625825.1 |
|
2.0 | PREDICTED: Gossypium raimondii U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like (LOC105796245), transcript variant X3, mRNA | U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like(LOC105796245) | coding protein | psRNATarget | |||||||||
| XM_012625823.1 |
|
2.0 | PREDICTED: Gossypium raimondii U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like (LOC105796245), transcript variant X1, mRNA | U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like(LOC105796245) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |