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BaseInfo

ncRNA ID gra-miR8747
Species Gossypium raimondii
Class miRNA
Genome position chr11:21522773-21522893 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - UCCCAGUUGUAGUUGGUCGUUCGG - 34
Stem-loop(if miRNA) UCCCAUCAA    C  A       U    -        --U   CAACGCAUA  UCAAACGUCC
         CCUG AC AUCAGCU GCAA UGGGGAAA   GUC         GA          A
         |||| || ||||||| |||| ||||||||   |||         ||          G
         GGGC UG UGGUUGA UGUU ACCCUUUU   CAG         AG          A
AAUAAUACC    U  C       -    G        UCU   --------A  AUAGCCUACA
Stem-loop sequence UCCCAUCAACCUGCACAAUCAGCUUGCAAUGGGGAAAUGUCCAACGCAUAGAUCAAACGUCCAGAACAUCCGAUAGAAGACUCUUUUUCCCAGUUGUAGUUGGUCGUUCGGGCCAUAAUAA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).