ncRNA ID | gra-miR8747 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr11:21522773-21522893 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - UCCCAGUUGUAGUUGGUCGUUCGG - 34 |
Stem-loop(if miRNA) |
UCCCAUCAA    C  A       U    -        --U   CAACGCAUA  UCAAACGUCC          CCUG AC AUCAGCU GCAA UGGGGAAA   GUC         GA          A          |||| || ||||||| |||| ||||||||   |||         ||          G          GGGC UG UGGUUGA UGUU ACCCUUUU   CAG         AG          A AAUAAUACC    U  C       -    G        UCU   --------A  AUAGCCUACA |
Stem-loop sequence | UCCCAUCAACCUGCACAAUCAGCUUGCAAUGGGGAAAUGUCCAACGCAUAGAUCAAACGUCCAGAACAUCCGAUAGAAGACUCUUUUUCCCAGUUGUAGUUGGUCGUUCGGGCCAUAAUAA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |