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BaseInfo

ncRNA ID gra-miR164a
Species Gossypium raimondii
Class miRNA
Genome position chr11:4583737-4583837 [-]
Reference genome Graimondii2_0
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - CAUGUGCCUUGGCUCUCCAUC - 31
Stem-loop(if miRNA) A    AAG   U C      AG            U    CUAUU      A
 GGGU   CCA G UGGAGA  CAGGGCACAUGC AAAU     AGGCAA A
 ||||   ||| | ||||||  |||||||||||| ||||     |||||| A
 CUCA   GGU C ACCUCU  GUUCCGUGUACG UUUA     UCUGUU U
-    -AA   U U      CG            U    --UUU      A
Stem-loop sequence AGGGUAAGCCAUGCUGGAGAAGCAGGGCACAUGCUAAAUCUAUUAGGCAAAAAUAUUGUCUUUUAUUUUGCAUGUGCCUUGGCUCUCCAUCUUGGAAACUC

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).