ncRNA ID | gra-miR164a |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr11:4583737-4583837 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - CAUGUGCCUUGGCUCUCCAUC - 31 |
Stem-loop(if miRNA) |
A    AAG   U C      AG            U    CUAUU      A  GGGU   CCA G UGGAGA  CAGGGCACAUGC AAAU     AGGCAA A  ||||   ||| | ||||||  |||||||||||| ||||     |||||| A  CUCA   GGU C ACCUCU  GUUCCGUGUACG UUUA     UCUGUU U -    -AA   U U      CG            U    --UUU      A |
Stem-loop sequence | AGGGUAAGCCAUGCUGGAGAAGCAGGGCACAUGCUAAAUCUAUUAGGCAAAAAUAUUGUCUUUUAUUUUGCAUGUGCCUUGGCUCUCCAUCUUGGAAACUC |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |