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BaseInfo

ncRNA ID gra-miR167a
Species Gossypium raimondii
Class miRNA
Genome position chr11:3832157-3832384 [-]
Reference genome Graimondii2_0
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - UCAGAUCAUCUUGCAGCUUCA - 31
Stem-loop(if miRNA) UU    A            C  C           -AUU    -U    AUCACUUUUUCUUUUUUCCUCC     UA  UAUGUUUUUUCUGCCUCUUUAGUGGUAUAUAUGCAGAUUGAAAGACC
  UGAG GGUUGAAGCUGC AG AUGAUCUGGUG    AACC  AGCU                      CUUUU  UG                                               A
  |||| |||||||||||| || |||||||||||    ||||  ||||                      |||||  ||
  ACUC CUAACUUCGACG UC UACUAGACUAC    UUGG  UGGA                      UACUU  GA                                               G
UC    A            U  -           AACU    UA    ----------------------     -C  UAUUUCAAGUUCGUCCGACUUCUAUUGAGUUCUUUAAAUUAGGUUUU
Stem-loop sequence UUUGAGAGGUUGAAGCUGCCAGCAUGAUCUGGUGAUUAACCUAGCUAUCACUUUUUCUUUUUUCCUCCCUUUUUAUGUAUGUUUUUUCUGCCUCUUUAGUGGUAUAUAUGCAGAUUGAAAGACCAGUUUUGGAUUAAAUUUCUUGAGUUAUCUUCAGCCUGCUUGAACUUUAUAGCUUCAUAGGUAUGGUUUCAACAUCAGAUCAUCUUGCAGCUUCAAUCACUCACU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).