| ncRNA ID | gra-miR8756 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr11:1644442-1644637 [+] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 11 - UGGACUGUUAAAAUUUUAAUGGCA - 34 |
| Stem-loop(if miRNA) |
- - C G G ---------- CAU UUU UU U AAAAAUU GGCUGGA UGUUAAAAUUUUAAU GCAUUGAU UGGCAAUUCAUAUGA GUACUUUGA GGAUAAU UUC GUAAAUUUU U ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||| ||| ||||||||| UUUUUAA UUGACCU ACAAUUUUAAAAUUG UGUGAUUA ACCGUUGAGUGUACU UAUGAAAUU UUUAUUA AAG UAUUUAAAG U A A U G A AUUAGGUGUA -UU UUU -U U |
| Stem-loop sequence | AAAAAUUGGCUGGACUGUUAAAAUUUUAAUGGCAUUGAUGUGGCAAUUCAUAUGAGUACUUUGACAUGGAUAAUUUUUUCUUGUAAAUUUUUUUUGAAAUUUAUUGAAUUUAUUAUUUUUUUAAAGUAUAUGUGGAUUAUCAUGUGAGUUGCCAAAUUAGUGUGGUUAAAAUUUUAACAUUCCAGUUAAAUUUUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012599704.1 |
|
1.5 | PREDICTED: Gossypium raimondii external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial-like (LOC105776791), mRNA | external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial-like(LOC105776791) | coding protein | psRNATarget | |||||||||
| XM_012585234.1 |
|
2.5 | PREDICTED: Gossypium raimondii putative nucleobase-ascorbate transporter 10 (LOC105765947), mRNA | putative nucleobase-ascorbate transporter 10(LOC105765947) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |