ncRNA ID | gra-miR8710b |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr11:1456052-1456256 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | 11 - AUACAUGAACUUUGGUCCAA - 30 |
Stem-loop(if miRNA) |
UAUC   UU      U   C       C          U G    ---AU       AA   UACACCUAGACCUCGAAUUGUGGUUCAAAUAUAUAAAUGAAA     AAA  UAUACA GAA UUUGGUC AAUGUGUAAU U AUAC     GAACUUU  UUA                                          G     |||  |||||| ||| ||||||| |||||||||| | ||||     |||||||  |||     UUU  GUAUGU CUU AAACUAG UUACACAUUA G UAUG     UUUUAUU  UAC                                          U UAUA   UC      U   A       A          C G    AAUAC       --   AUACGUAAGUAAAAAAUUUACACAAUUAACAUAGUUUUAGUU |
Stem-loop sequence | UAUCAAAUUUAUACAUGAACUUUGGUCCAAUGUGUAAUUUGAUACAUGAACUUUAAUUAUACACCUAGACCUCGAAUUGUGGUUCAAAUAUAUAAAUGAAAGUUUGAUUUUGAUACAAUUAACACAUUUAAAAAAUGAAUGCAUACAUUUAUUUUCAUAAGUAUGGCAUUACACAUUAGAUCAAAAUUCUUGUAUGCUUUUAUAU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |