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BaseInfo

ncRNA ID gra-miR8710b
Species Gossypium raimondii
Class miRNA
Genome position chr11:1456052-1456256 [+]
Reference genome Graimondii2_0
Source miRBase
Length 20
Mature sequence(if miRNA) 11 - AUACAUGAACUUUGGUCCAA - 30
Stem-loop(if miRNA) UAUC   UU      U   C       C          U G    ---AU       AA   UACACCUAGACCUCGAAUUGUGGUUCAAAUAUAUAAAUGAAA
    AAA  UAUACA GAA UUUGGUC AAUGUGUAAU U AUAC     GAACUUU  UUA                                          G
    |||  |||||| ||| ||||||| |||||||||| | ||||     |||||||  |||
    UUU  GUAUGU CUU AAACUAG UUACACAUUA G UAUG     UUUUAUU  UAC                                          U
UAUA   UC      U   A       A          C G    AAUAC       --   AUACGUAAGUAAAAAAUUUACACAAUUAACAUAGUUUUAGUU
Stem-loop sequence UAUCAAAUUUAUACAUGAACUUUGGUCCAAUGUGUAAUUUGAUACAUGAACUUUAAUUAUACACCUAGACCUCGAAUUGUGGUUCAAAUAUAUAAAUGAAAGUUUGAUUUUGAUACAAUUAACACAUUUAAAAAAUGAAUGCAUACAUUUAUUUUCAUAAGUAUGGCAUUACACAUUAGAUCAAAAUUCUUGUAUGCUUUUAUAU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).