ncRNA ID | gra-miR8635 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr11:1104959-1105330 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - UCGGAUCUUCAAACGGUGGAG - 31 |
Stem-loop(if miRNA) |
- U C AA U AC GA A CA UC -- GA UGAGGAAAGCCCAACGGGUUUACAGAGUUUGGGGAGUACCUCAUGACUAAGGAAAUAUGAGCAUUCGGCCUUGCUGGAGUUUGAACCCAUGUUUUUU GAG UCGGUCU GGAUCUUCAAACGGUGGAG AUU UG CG GUGUCUA GUU AUUUUAGU UAGGU UGUCUCUU UUC A ||| ||||||| ||||||||||||||||||| ||| || || ||||||| ||| |||||||| ||||| |||||||| ||| U CUC AGUCAGA CCUGGGAGUUUGUCACCUU UAA AC GC CGUAGAU UAA UAAAAUCG GUUCA ACAGAGAG CGG A C C A CA C GA UC A AC GA AA UU AUUGUCUAAGUGUUUCAAACCCCUCUUUACAAUUUUUAAAACCGGAACUAUUCUAAGGUUGGGUACGGAAAUCACCUCAAGAAUGGGUGAUUACGGU |
Stem-loop sequence | GAGUUCGGUCUCGGAUCUUCAAACGGUGGAGAAAUUUUGACCGGAGUGUCUAAGUUCAAUUUUAGUUCUAGGUUGUCUCUUGAUUCUGAGGAAAGCCCAACGGGUUUACAGAGUUUGGGGAGUACCUCAUGACUAAGGAAAUAUGAGCAUUCGGCCUUGCUGGAGUUUGAACCCAUGUUUUUUAUAUGGCAUUAGUGGGUAAGAACUCCACUAAAGGCAUGGGUUGGAAUCUUAUCAAGGCCAAAAUUUUUAACAUUUCUCCCCAAACUUUGUGAAUCUGUUAGGCUUGAGAGACAAAACUUGAGGCUAAAAUCAAAUAUAGAUGCCUCGAGCACAAUACUUCCACUGUUUGAGGGUCCAAGACUGACCUCC |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |