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BaseInfo

ncRNA ID	gra-miR8682
Species	Gossypium raimondii
Class	miRNA
Genome position	chr10:61924019-61924168 [+]
Reference genome	Graimondii2_0
Source	miRBase
Length	21
Mature sequence(if miRNA)	120 - ACUAGCUCAGGCUCUCGGCAG - 140
Stem-loop(if miRNA)	G     UG A             CA                C       A        AA   ACUCUGGCUCU  UCUCC  A UUUGUCGAGAGCC  AGCUGGUUUACAGAGU ACUUUAC GAGAGCCU  GGC           A  |||||  | |||||||||||||  |||||||||||||||| ||||||| ||||||||  |||           U  AGAGG  U GGACGGCUCUCGG  UCGAUCAAGUGUUUUA UGAGAUG UUUUCGGA  AUA           G -     GU G             AC                U       G        CU   CCACUGCCCAA
Stem-loop sequence	GUCUCCUGAAUUUGUCGAGAGCCCAAGCUGGUUUACAGAGUCACUUUACAGAGAGCCUAAGGCACUCUGGCUCUAUGAACCCGUCACCAUAUCAGGCUUUUGGUAGAGUUAUUUUGUGAACUAGCUCAGGCUCUCGGCAGGGUUGGGAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012624961.1	ncRNA:21   GACGGCUCUCGGACUCGAUCA   1   |*|=|**|||||||||||||| targets:861   CAGUCAUGAGCCUGAGCUAGU   881 Target Full Sequence	3.0	PREDICTED: Gossypium raimondii ribosome production factor 1 (LOC105795356), mRNA	ribosome production factor 1(LOC105795356)	coding protein	psRNATarget

Reference

1	PMID:24044642 "Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013).