ncRNA ID | gra-miR8702 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr10:58834832-58835010 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - AGGUAUUGUCUCUGGGGAAGGGUU - 34 |
Stem-loop(if miRNA) |
-       A   G          -              G            C                ----U    CUUGGUUGGUGGCCA  CAAUAAU GAA GUAUUGUCUC UGGGGAAGGGUUUU UCCCCCCUCCAC GAGAGCCGUGUACGGU     GCCU               U  ||||||| ||| |||||||||| |||||||||||||| |||||||||||| ||||||||||||||||     ||||  GUUAUUA CUU CAUAACAGGG AUUCCUUCCCAAGG GGGGGGGGGGUG CUCUCGGUACAUGCCA     CUCC               A A       C   A          C              -            U                CGUGU    UCUCGCGGAGCUGGG |
Stem-loop sequence | CAAUAAUAGAAGGUAUUGUCUCUGGGGAAGGGUUUUGUCCCCCCUCCACCGAGAGCCGUGUACGGUUGCCUCUUGGUUGGUGGCCAUAGGGUCGAGGCGCUCUCCUCUGUGCACCGUACAUGGCUCUCUGUGGGGGGGGGGGGAACCCUUCCUUACGGGACAAUACAUUCCAUUAUUGA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |