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BaseInfo

ncRNA ID gra-miR8702
Species Gossypium raimondii
Class miRNA
Genome position chr10:58834832-58835010 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - AGGUAUUGUCUCUGGGGAAGGGUU - 34
Stem-loop(if miRNA) -       A   G          -              G            C                ----U    CUUGGUUGGUGGCCA
 CAAUAAU GAA GUAUUGUCUC UGGGGAAGGGUUUU UCCCCCCUCCAC GAGAGCCGUGUACGGU     GCCU               U
 ||||||| ||| |||||||||| |||||||||||||| |||||||||||| ||||||||||||||||     ||||
 GUUAUUA CUU CAUAACAGGG AUUCCUUCCCAAGG GGGGGGGGGGUG CUCUCGGUACAUGCCA     CUCC               A
A       C   A          C              -            U                CGUGU    UCUCGCGGAGCUGGG
Stem-loop sequence CAAUAAUAGAAGGUAUUGUCUCUGGGGAAGGGUUUUGUCCCCCCUCCACCGAGAGCCGUGUACGGUUGCCUCUUGGUUGGUGGCCAUAGGGUCGAGGCGCUCUCCUCUGUGCACCGUACAUGGCUCUCUGUGGGGGGGGGGGGAACCCUUCCUUACGGGACAAUACAUUCCAUUAUUGA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).