ncRNA ID | ath-miR3933 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr5:15758105-15758192 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 7 - AGAAGCAAAAUGACGACUCGG - 27 |
Stem-loop(if miRNA) |
         A               G           UACAAA CUUAGAAGA GCAAAAUGACGACUC GACAACAAUAA      A ||||||||| ||||||||||||||| ||||||||||| GAAUCUUCU CGUUUUACUGCUGAG CUGUUGUUAUU      C          A               G           CAUAAU |
Stem-loop sequence | CUUAGAAGAAGCAAAAUGACGACUCGGACAACAAUAAUACAAAACUAAUACUUAUUGUUGUCGGAGUCGUCAUUUUGCAUCUUCUAAG |
1 | PMID:20621980
"siRNAs from miRNA sites mediate DNA methylation of target genes"; Chellappan P, Xia J, Zhou X, Gao S, Zhang X, Coutino G, Vazquez F, Zhang W, Jin H; Nucleic Acids Res. 38:6883-6894(2010). |