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BaseInfo

ncRNA ID	gra-miR7504i
Species	Gossypium raimondii
Class	miRNA
Genome position	chr10:37907762-37907962 [-]
Reference genome	Graimondii2_0
Source	miRBase
Length	21
Mature sequence(if miRNA)	171 - AUAUGAAACUGAGAUACCAUG - 191
Stem-loop(if miRNA)	-          A  U       A              U     CA               U                -         ---------U       C  AGAAAGGAUU UA GAAACUG GAUACCAUGUCAUU GUAUC  UUUUCAAUAAUUUAA GUCAUUUUAGCAUUUU CAUCUUAAA          UUCAGCA A  |||||||||| || ||||||| |||||||||||||| |||||  ||||||||||||||| |||||||||||||||| |||||||||          ||||||| U  UCUUUUCUAA AU CUUUGAC CUAUGGUACAGUAA CAUAG  AAAAGUUAUUAAAUU UAGUAAAAUCGUAAAA GUAGAAUUU          AGGUUGU U C          C  U       C              -     AG               U                A         UUAUUGGUUU       A
Stem-loop sequence	AGAAAGGAUUAUAUGAAACUGAGAUACCAUGUCAUUUGUAUCCAUUUUCAAUAAUUUAAUGUCAUUUUAGCAUUUUCAUCUUAAAUUUCAGCACAUUAUGUUGGAUUUGGUUAUUUUUAAGAUGAAAAAUGCUAAAAUGAUUUUAAAUUAUUGAAAAGAGAUACAAUGACAUGGUAUCCCAGUUUCUUACAAUCUUUUCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012582676.1	ncRNA:21   GUACCAUAGAGUCAAAGUAUA   1   =||*|*||||||||||||||* targets:60   UAUUGGAUCUCAGUUUCAUAC   80 Target Full Sequence	3.0	PREDICTED: Gossypium raimondii uclacyanin-3 (LOC105764164), mRNA	uclacyanin-3(LOC105764164)	coding protein	psRNATarget

Reference

1	PMID:24044642 "Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013).