| ncRNA ID | gra-miR8771d |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr10:33577926-33578200 [-] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - UGCCAUGUAGGAUUGUCGUUA - 31 |
| Stem-loop(if miRNA) |
G C C UAAACUUAAAUGU CUA A - CACUCAAAAC - UAAAAGAAAAAGGAGACGAAUGGUUUUUCUUUUC UUACCUC UUAACGACAAUCCUACG GGCAGUCUAAAUGGGUUUUAAAUA CCAA GGAU AGAAUAG UUUUUU GGAAAAG AAAAC C ||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||||| |||||| ||||||| ||||| A AAUGGAG GAUUGCUGUUAGGAUGU CCGUUAGGUUUACUCAAAAUUUAU GGUU CCUA UCUUAUC AAAAAA AUUUAUU AAAUU A A U A ------------- AAC C C -------UUA U AAUUAACUUUUAAAAUUUAAUAAAUAUGGAACUU |
| Stem-loop sequence | GUUACCUCCUUAACGACAAUCCUACGCGGCAGUCUAAAUGGGUUUUAAAUAUAAACUUAAAUGUCCAACUAGGAUAAGAAUAGUUUUUUCACUCAAAACGGAAAAGAAAACUAAAAGAAAAAGGAGACGAAUGGUUUUUCUUUUCCAAUUCAAGGUAUAAAUAAUUUAAAAUUUUCAAUUAAUUAAAUUUAUUUAAUUAAAAAACCUAUUCUCAUCCCAAUUGGUAUUUAAAACUCAUUUGGAUUGCCAUGUAGGAUUGUCGUUAGUGAGGUAAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012628940.1 |
|
1.0 | PREDICTED: Gossypium raimondii QWRF motif-containing protein 8-like (LOC105798736), transcript variant X5, mRNA | QWRF motif-containing protein 8-like(LOC105798736) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |