| ncRNA ID | ath-miR5645f |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr5:14946671-14947169 [-] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 20 |
| Mature sequence(if miRNA) | 410 - AUUUGAGUCAUGUCGUUAAG - 429 |
| Stem-loop(if miRNA) |
- UAU U A A G UC C C CUC A C C CUC UUGUCUGUUGAAACAAAUUUAAACCCUAAAUCCCUAAAUCGAUUUCAUUAUCUGCGAUUUUGAGGUCAAUGUGGG CGGAAGACAAAUAAAUCG AGUUUUUGUUG UUUUC AAAUAAAUGACAA GUUUUUGUUGA UUGUCAUUUGAG AUGUCGUUAAGUAGGUUAA AGAAUUUUUUUACGGCGUUAAUGUCU GUUUAU CU UGUUAGAACAAAACAACGUU UU AUUGCAG GUU U |||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||| || |||||||||||||||||||| || ||||||| ||| C GUCUUCUGUUUAUUUAGC UCAAAAACAAC GAAAG UUUAUUUACUGUU CAAAAACAACU AACGGUAAACUC UAUAGUAAUUUAUUCAAUU UUUUAAAAAAAUGCCGCAAUUACAGA CAAAUA GA ACAAUCUUGUUUUGUUGCAG AA UAACGUC UGC U U UGU U C - G -- - A AAU A C A -UC UUUGCUGCAACAAAACAGAAAACUUUGUUUAUAUUUGGGAUUAAAGGGUUUAACUAAAGUAAUAGAGUUUUAGUC |
| Stem-loop sequence | CGGAAGACAAAUAAAUCGUAUAGUUUUUGUUGUUUUUCAAAAUAAAUGACAAAGUUUUUGUUGAGUUGUCAUUUGAGUCAUGUCGUUAAGUAGGUUAACAGAAUUUUUUUACGGCGUUAAUGUCUCGUUUAUCUCCUAUGUUAGAACAAAACAACGUUCUUCAUUGCAGCUCGUUUUGUCUGUUGAAACAAAUUUAAACCCUAAAUCCCUAAAUCGAUUUCAUUAUCUGCGAUUUUGAGGUCAAUGUGGGUCUCUGAUUUUGAGAUAAUGAAAUCAAUUUGGGAAAUUAGGGUUUAUAUUUGUUUCAAAAGACAAAACAACGUCGUUUCGUCUCUGCAAUAAACGACGUUGUUUUGUUCUAACAAAGUAAAUAAACAAGACAUUAACGCCGUAAAAAAAUUUUUUAACUUAUUUAAUGAUAUCUCAAAUGGCAAGUCAACAAAAACUUGUCAUUUAUUUCGAAAGUCAACAAAAACUUGUCGAUUUAUUUGUCUUCUGU |
| 1 | PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012). |