| ncRNA ID | ath-miR5638b |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr5:14099737-14100205 [+] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 281 - ACAGUGGUCAUCUGGUGGGCU - 301 |
| Stem-loop(if miRNA) |
AACAAUGUUGUGGUCUUUC A C G A U C ---G GUA C - A A --- U AUAAA C ACUA U ---- CCACCAAAUAACCAUUGUGAUUGUUCAUAAAGUGUUACCUUCAUAUUUUGCAAAACCUCUUAACCAAUC GAUGAGAGA UGUG UUGGG ACAAUUGG GCAG UUGA UCCCUUAC GUUA UGA GGUUUGAAA GUGA AGA CUUUGGUAUGUUU C AGAAAGUAA UGAAUCCAAGUUU GAGCACACUGUCUUUAC GUG GGCA GC A ||||||||| |||| ||||| |||||||| |||| |||| |||||||| |||| ||| ||||||||| |||| ||| ||||||||||||| | ||||||||| ||||||||||||| ||||||||||||||||| ||| |||| || CUACUCUCU ACAC AACUC UGUUAACC UGUC AGCU AGGGAAUG CAAU ACU UCAAACUUU CACU UCU GAAACCAUACAAA G UUUUUCAUU GCUUAGGUUCAAA CUCGUGUGGUAGAAAUG CAC CCGU CU C ------------------C C A A A U A AUGA AAA - U C C ACU C ----A A AAAC - AUCA AUUUAAGAUGUCGGGUGGUCUACUGGUGACACUAACAAUUUACUUUACAAGUUUGAGAUGAAACGUGAG |
| Stem-loop sequence | AACAAUGUUGUGGUCUUUCGAUGAGAGAAUGUGCUUGGGGACAAUUGGAGCAGUUUGACUCCCUUACGGUUAGUAUGACGGUUUGAAAGUGAAAGAACUUUGGUAUGUUUCUAGAAAGUAAAUAAAUGAAUCCAAGUUUCGAGCACACUGUCUUUACACUAGUGUGGCAGCCCACCAAAUAACCAUUGUGAUUGUUCAUAAAGUGUUACCUUCAUAUUUUGCAAAACCUCUUAACCAAUCACGAGUGCAAAGUAGAGUUUGAACAUUUCAUUUAACAAUCACAGUGGUCAUCUGGUGGGCUGUAGAAUUUAUCACUAUGCCCACCAAAGUAAAGAUGGUGUGCUCAAAACUUGGAUUCGAUUACUUUUUCGUCAAAACAUACCAAAGCUCUCUCACUUUUCAAACUUCAAAAUAACAGUAGUAAGGGAAUCGAUCUGUACCAAUUGUACUCAAACACACUCUCUCAUCC |
| 1 | PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012). |