| ncRNA ID | gra-miR8678 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr1:52608276-52608402 [-] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - AAUUUGGACUGUCACGUAGGA - 31 |
| Stem-loop(if miRNA) |
AACUU AU A A AAAAUUA AAAAA U --UC A GG GUCCUAC UGGCA UCCAAAUU UUUAAUU CUA UUUCA CCA C || ||||||| ||||| |||||||| ||||||| ||| ||||| ||| A CC CAGGAUG ACUGU AGGUUUAA AAAUUGA GGU AAAGU GGU A GAUUG AU C C ----CCA ----C U UAUA C |
| Stem-loop sequence | AACUUGGAUGUCCUACAUGGCAAUCCAAAUUAAAAUUAUUUAAUUAAAAACUAUUUUCAUCCCAACAACUGGAUAUUGAAAUUGGCAGUUAAAACCAAUUUGGACUGUCACGUAGGACUACCGUUAG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012628940.1 |
|
1.5 | PREDICTED: Gossypium raimondii QWRF motif-containing protein 8-like (LOC105798736), transcript variant X5, mRNA | QWRF motif-containing protein 8-like(LOC105798736) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |