ncRNA ID | gra-miR8679 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr1:47791983-47792087 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 72 - ACAAGCGAGUUAAGGAUGUGACAA - 95 |
Stem-loop(if miRNA) |
AAA    A             G     C A        AAC    C      A    AGGA CACUUGUUACAUC UUAAC C CUUGUGGA   UCUA AAGGCU U    |||| ||||||||||||| ||||| | ||||||||   |||| ||||||    UCCU GUGAACAGUGUAG AAUUG G GAACACCU   AGAU UUUUGA G AUA    -             G     A C        --C    U      G |
Stem-loop sequence | AAAAGGAACACUUGUUACAUCGUUAACCCACUUGUGGAAACUCUACAAGGCUAUGGAGUUUUUUAGACUCCACAAGCGAGUUAAGGAUGUGACAAGUGUCCUAUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |