ncRNA ID | gra-miR8683 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr1:45746048-45746247 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - AGAACUCAUAACACAUUUAGAUAA - 34 |
Stem-loop(if miRNA) |
U            C   C     A                   U              G   A                U        UUCA   GUCA  AAACACAAAAUU UCU AAUGU UUAUGAGUUCUAAUCUAAU GGUGUAUUUUCUAA GUU UAAAAGAGCCUAUUUA AGGCUAAA    UAU    A  |||||||||||| ||| ||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| ||||||||    |||    A  UUUGUGUUUUAA AGA UUACA AAUACUCAAGAUUAGAUUA UCACAUAAAAGAUU CAA AUUUUCUCGGAUAAAU UCCGAUUU    AUA    U -            U   U     C                   C              A   C                C        UAAA   AUAA |
Stem-loop sequence | UAAACACAAAAUUCUCUCAAUGUAUUAUGAGUUCUAAUCUAAUUGGUGUAUUUUCUAAGGUUAUAAAAGAGCCUAUUUAUAGGCUAAAUUCAUAUGUCAAAUAAUAAUAAAAUUUUAGCCUCUAAAUAGGCUCUUUUACAACAUUAGAAAAUACACUCAUUAGAUUAGAACUCAUAACACAUUUAGAUAAUUUUGUGUUU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |