ncRNA ID | gra-miR8684 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr1:11357060-11357238 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - AGAAUGACUGGUUUACUCUUU - 31 |
Stem-loop(if miRNA) |
U   C    C              U     U      -     ---    --      UAUACUAUUAAAAC UG   U  UUGACAAAAUAUGUACCUC  AUG UAGA CAAAGAGUAAAUCA UUAUU CUAUUA AAAAU   UUCA  UCUAUU              U  GCA GG                   U  ||| |||| |||||||||||||| ||||| |||||| |||||   ||||  ||||||              |  ||| ||  UAC AUCU GUUUCUCAUUUGGU AGUAA GAUAAU UUUUA   AAGU  AGAUAA              A  UUU UU                   U -   A    A              C     -      A     UAU    AA      ------------CA --   -  GACUAAAAAUAUUCAGUUG |
Stem-loop sequence | UAUGCUAGACCAAAGAGUAAAUCAUUUAUUUCUAUUAAAAAUUUCAUCUAUUUAUACUAUUAAAACUUGGCAUGGUUGACAAAAUAUGUACCUCUUGUUGACUUAUAAAAAUCAGUUUUUAACAAUAGAAAUGAAUAUAUUUUAUAAUAGAAUGACUGGUUUACUCUUUGAUCUAACAU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |