| ncRNA ID | gra-miR8637 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr1:10368597-10368963 [+] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 11 - AGGCCCCUGUAUUGAGAGUCGGAU - 34 |
| Stem-loop(if miRNA) |
- C C UUA - C C GC U -GUAC A C -CUAG A AUC G CA C CC A UCAGCGUAAAGUAUACGUGGUAUGC AGUA CAUGGAGGCCC UGUAUUGAGAGUCGGAUUGC UUGCCC CUU UACU AAAAAAUGG AAAUUAGU CCU GU AGGUCAAAGAG AAG UCUUUCUGUUAAAAAUU C CA UUUUA GUUAAAAA UGGU CU UAUG C |||| ||||||||||| |||||||||||||||||||| |||||| ||| |||| ||||||||| |||||||| ||| || ||||||||||| ||| ||||||||||||||||| | || ||||| |||||||| |||| || |||| UCAU GUACCUCUGGG ACAUGAUUCUCAGUCUAACG AACGGG GAA AUGA UUUUUUAUC UUUAGUUA GGA CA UCUAGUUUCUC UUU AGAAAGACAAUUUUUAA G GU AAGAU CAAUUUUU ACUA UA CCGA A U A U UAA A - A GA - AAAUU C U AACCA A AAA A AA A -- - CUGUUUUAUUGAUUUGACAAUGUAA |
| Stem-loop sequence | AGUACCAUGGAGGCCCCUGUAUUGAGAGUCGGAUUGCUUAUUGCCCCUUCUACUCAAAAAAUGGGCAAAUUAGUUCCUGUACGUAAGGUCAAAGAGCAAGCUAGUCUUUCUGUUAAAAAUUACAUCCAGUUUUACAGUUAAAAACUGGUCCCUAUAUGUCAGCGUAAAGUAUACGUGGUAUGCCAAAUGUAACAGUUUAGUUAUUUUGUCAGCCAUAUCAAUUUUUAACAAUAGAAAUGAAAGAAAUUUUUAACAGAAAGAACCAAUUUUCUCUUUGAUCUCACUUAAAAGGAUUGAUUUAGCUAUUUUUUAAGUAAAGAGGGCAAAAUGCAAUCUGACUCUUAGUACAUGGGUCUCCAUGAUACUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012612454.1 |
|
2.5 | PREDICTED: Gossypium raimondii transcription factor TGA3-like (LOC105786141), transcript variant X2, mRNA | transcription factor TGA3-like(LOC105786141) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |