| ncRNA ID | gra-miR7484g |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr1:9134356-9134538 [-] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 150 - UUCUUAUAUGUUAGAUCAAAGAGC - 173 |
| Stem-loop(if miRNA) |
- - C U C U C ---- A AAUGAUA -C A G - UUU AG CAAA UAGUUCUUAUA GUUAGAU AAAGAGCA ACUG UC CU UUAAA UCCAUUUCUA GUUAAAA UC G GCU A || |||| ||||||||||| ||||||| |||||||| |||| || || ||||| |||||||||| ||||||| || | ||| UC GUUU AUCAGGGAUAU CAAUCUA UUUCUCGU UGGC AG GA AAUUU AGGUAAAGAU CAAUUUU AG U CGA U A A A - A U C UAAA C CCAAAGG AA A G G CUG |
| Stem-loop sequence | AGCAAACUAGUUCUUAUAUGUUAGAUCAAAGAGCAUACUGCUCCUAUUAAAAAUGAUAUCCAUUUCUACGUUAAAAAUCGGGCUUUUAUGUCAGCGUGGAAUUUUAACAAUAGAAAUGGAGGAAACCUUUAACAGAAAUGACCGGUUUGCUCUUUAAUCUAACUAUAGGGACUAAUUUGACUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012617601.1 |
|
2.5 | PREDICTED: Gossypium raimondii G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 (LOC105790161), transcript variant X1, mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370(LOC105790161) | coding protein | psRNATarget | |||||||||
| XM_012617602.1 |
|
2.5 | PREDICTED: Gossypium raimondii G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 (LOC105790161), transcript variant X2, mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370(LOC105790161) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |