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BaseInfo

ncRNA ID gra-miR8716
Species Gossypium raimondii
Class miRNA
Genome position chr1:5373782-5373894 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 80 - AUGUGUCAAAAUGUGAGGCUGUCA - 103
Stem-loop(if miRNA) UG         U  U     A                  AAAAG   -       U
  GUGACAUGU AC AGCCU ACAUUUUGACACGUGGAA     UUA AAAUAUU A
  ||||||||| || ||||| ||||||||||||||||||     ||| ||||||| U
  CACUGUGCA UG UCGGA UGUAAAACUGUGUAUCUU     AAU UUUAUAA A
AA         C  -     G                  AUAAA   A       A
Stem-loop sequence UGGUGACAUGUUACUAGCCUAACAUUUUGACACGUGGAAAAAAGUUAAAAUAUUUAUAAAAUAUUUAUAAAAAUAUUCUAUGUGUCAAAAUGUGAGGCUGUCACGUGUCACAA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).