| ncRNA ID | gra-miR8767c |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr1:3731724-3731985 [-] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 232 - UUUUCAACUCUGCCAAGCAAU - 252 |
| Stem-loop(if miRNA) |
- CU ----G AAAUAAAAAUUACUUUUUCUUUCAAUUUUUCCAUCUCUCCUACCAAGCACACCUAUGGAAAGAAAAAAAAUAUAUUUUCCCUCAUUCU UUCCUUUC UUUUCAACUCUGCCAAGCAAUGGA GUAA A |||||||| |||||||||||||||||||||||| |||| U AAGGAAAG AAAAGUUGAGAUGGUUCGUUACCU AGGU U A UC AUCUU AAAAAAGUAGAGAGGACCGUUCCUGUGGAUACCUUUCUUUUUAUUACAAAAGGUAAGAAGAUUUCUACCUUUUAACUUCCCCGUCUUU |
| Stem-loop sequence | UUCCUUUCCUUUUUCAACUCUGCCAAGCAAUGGAGGUAAAAAUAAAAAUUACUUUUUCUUUCAAUUUUUCCAUCUCUCCUACCAAGCACACCUAUGGAAAGAAAAAAAAUAUAUUUUCCCUCAUUCUAUUUUUCUGCCCCUUCAAUUUUCCAUCUUUAGAAGAAUGGAAAACAUUAUUUUUCUUUCCAUAGGUGUCCUUGCCAGGAGAGAUGAAAAAAUGGAUUCUAUCCAUUGCUUGGUAGAGUUGAAAACUGAAAGGAAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012611726.1 |
|
2.5 | PREDICTED: Gossypium raimondii protein BASIC PENTACYSTEINE2-like (LOC105785614), transcript variant X1, mRNA | protein BASIC PENTACYSTEINE2-like(LOC105785614) | coding protein | psRNATarget | |||||||||
| XM_012611727.1 |
|
2.5 | PREDICTED: Gossypium raimondii protein BASIC PENTACYSTEINE2-like (LOC105785614), transcript variant X2, mRNA | protein BASIC PENTACYSTEINE2-like(LOC105785614) | coding protein | psRNATarget | |||||||||
| XM_012634857.1 |
|
3.0 | PREDICTED: Gossypium raimondii uncharacterized LOC105802943 (LOC105802943), mRNA | uncharacterized LOC105802943(LOC105802943) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |