ncRNA ID | gma-miR4402 |
Species | Glycine max |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | NA - ACAUAUUAUGGGUCUCAGACGGAC - NA |
Stem-loop(if miRNA) |
----A                            C  A                     AA    U   -CAAA   GAUUUAGUCAACU      CGUUUGAGGCCCAUAAUAUGUUAAAAUG UC AAAUUAAAUGAGGAAUCCCCU  CAAA AUC     GGG             C      |||||||||||||||||||||||||||| || |||||||||||||||||||||  |||| |||     |||             A      GCAGACUCUGGGUAUUAUACAGUUUUAC AG UUUAAUUUACUCCUUAGGGGA  GUUU UAG     AGG             U UACAG                            A  C                     CC    U   AAUUU   AUAAAAACCUUUU |
Stem-loop sequence | ACGUUUGAGGCCCAUAAUAUGUUAAAAUGCUCAAAAUUAAAUGAGGAAUCCCCUAACAAAUAUCCAAAGGGGAUUUAGUCAACUCAUUUUUCCAAAAAUAGGAUUUAAGAUUUUUGCCAGGGGAUUCCUCAUUUAAUUUCGAACAUUUUGACAUAUUAUGGGUCUCAGACGGACAU |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |