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BaseInfo

ncRNA ID gma-miR4402
Species Glycine max
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 24
Mature sequence(if miRNA) NA - ACAUAUUAUGGGUCUCAGACGGAC - NA
Stem-loop(if miRNA) ----A                            C  A                     AA    U   -CAAA   GAUUUAGUCAACU
     CGUUUGAGGCCCAUAAUAUGUUAAAAUG UC AAAUUAAAUGAGGAAUCCCCU  CAAA AUC     GGG             C
     |||||||||||||||||||||||||||| || |||||||||||||||||||||  |||| |||     |||             A
     GCAGACUCUGGGUAUUAUACAGUUUUAC AG UUUAAUUUACUCCUUAGGGGA  GUUU UAG     AGG             U
UACAG                            A  C                     CC    U   AAUUU   AUAAAAACCUUUU
Stem-loop sequence ACGUUUGAGGCCCAUAAUAUGUUAAAAUGCUCAAAAUUAAAUGAGGAAUCCCCUAACAAAUAUCCAAAGGGGAUUUAGUCAACUCAUUUUUCCAAAAAUAGGAUUUAAGAUUUUUGCCAGGGGAUUCCUCAUUUAAUUUCGAACAUUUUGACAUAUUAUGGGUCUCAGACGGACAU

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).