| ncRNA ID | gma-miR396k-3p |
| Species | Glycine max |
| Class | miRNA |
| Genome position | NA |
| Reference genome | NA |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | NA - GCUCAAGAAAGCUGUGGGAGA - NA |
| Stem-loop(if miRNA) |
UUCCUCUC U ---- C A UAU AUCUUAUAUCUCUC AAG CCUG GUCAUG UUUUCCACAGCUUUCUUGA CUUCU GC C ||| |||| |||||| ||||||||||||||||||| ||||| || A UUC GGAC CGGUAU AGAGGGUGUCGAAAGAACU GAAGA CG C -GUUAAUU - UUAA A C UCC AAUUUUACGACCUU |
| Stem-loop sequence | UUCCUCUCAAGUCCUGGUCAUGCUUUUCCACAGCUUUCUUGAACUUCUUAUGCAUCUUAUAUCUCUCCACUUCCAGCAUUUUAAGCCCUAGAAGCUCAAGAAAGCUGUGGGAGAAUAUGGCAAUUCAGGCUUUUAAUUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| JB171049.1 |
|
2.5 | Sequence 8713 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
| HI410588.1 |
|
2.5 | Sequence 8713 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
| LQ242718.1 |
|
2.5 | Sequence 8713 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
| BT092755.1 |
|
2.5 | Soybean clone JCVI-FLGm-11N21 unknown mRNA | NA | coding protein | psRNATarget |
| 1 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |
| 2 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |