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BaseInfo

ncRNA ID gma-miR319q
Species Glycine max
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGGACUGAAGGGAGCUCCUUC - NA
Stem-loop(if miRNA)      U            C    C   UU      UAUAAU      UU     G UGAAUUAACUGA       AUACAAUAGUAUUCAAUUAGGGUAA
GAGAG GAAGGAGUUUCC UCAG CCA  CAUGGA      GAAAGA  GGGUU C            UUCAUUC                         U
||||| |||||||||||| |||| |||  ||||||      ||||||  ||||| |            |||||||                         A
UUUUU CUUCCUCGAGGG AGUC GGU  GUGUCU      CUUUCU  CCCAA G            UUAUAUC                         U
     -            A    A   UC      ------      CC     G ------------       UAUGAUAUGAGAGAAGUAAGUGUGU
Stem-loop sequence GAGAGUGAAGGAGUUUCCCUCAGCCCAUUCAUGGAUAUAAUGAAAGAUUGGGUUGCUGAAUUAACUGAUUCAUUCAUACAAUAGUAUUCAAUUAGGGUAAUAUUGUGUGAAUGAAGAGAGUAUAGUAUCUAUAUUGGAACCCCCUCUUUCUCUGUGCUUGGACUGAAGGGAGCUCCUUCUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB170935.1
ncRNA:21   CUUCCUCGAGGGAAGUCAGGU   1
  |||||||||||||||||||||
targets:11   GAAGGAGCUCCCUUCAGUCCA   31

0.0 Sequence 8599 from Patent EP2559767 NA coding protein psRNATarget
HI410474.1
ncRNA:21   CUUCCUCGAGGGAAGUCAGGU   1
  |||||||||||||||||||||
targets:11   GAAGGAGCUCCCUUCAGUCCA   31

0.0 Sequence 8599 from Patent EP2074227 NA coding protein psRNATarget
LQ242604.1
ncRNA:21   CUUCCUCGAGGGAAGUCAGGU   1
  |||||||||||||||||||||
targets:11   GAAGGAGCUCCCUUCAGUCCA   31

0.0 Sequence 8599 from Patent EP2985353 NA coding protein psRNATarget
BT098668.1
ncRNA:21   CUUCCUCGAGGGAAGUCAGGU   1
  |||||||||||||||||||||
targets:278   GAAGGAGCUCCCUUCAGUCCA   298

0.0 Soybean clone JCVI-FLGm-12F22 unknown mRNA NA coding protein psRNATarget

Reference

1 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).