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BaseInfo

ncRNA ID	gma-miR2119
Species	Glycine max
Class	miRNA
Genome position	NA
Reference genome	NA
Source	miRBase
Length	21
Mature sequence(if miRNA)	NA - UCAAAGGGAGUUGUAGGGGAA - NA
Stem-loop(if miRNA)	U          U    UAAUU         C   A    U           -       UAGAAA AUAC UCAUUUUUUA ACUU     UCCUCUAUA CUC CUUU AUUGGAGAAAA AAGAGAA      A |||| |||||||||| ||||     ||||||||| ||| |||| ||||||||||| |||||||      U UGUG GGUAAAAGAU UGAA     AGGGGAUGU GAG GAAA UAACUUUUUUU UUCUCUU      A     C          U    -----         U   G    C           C       UAGGUG
Stem-loop sequence	AUACUUCAUUUUUUAUACUUUAAUUUCCUCUAUACCUCACUUUUAUUGGAGAAAAAAGAGAAUAGAAAAUAGUGGAUUUCUCUUCUUUUUUUCAAUCAAAGGGAGUUGUAGGGGAAAGUUUAGAAAAUGGCGUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006580170.2	ncRNA:21   AAGGGGAUGUUGAGGGAAACU   1   *||=||*=||||||||||||| targets:2254   AUCUCCAGCAACUCCCUUUGA   2274 Target Full Sequence	3.0	PREDICTED: Glycine max subtilisin-like protease SBT2.5 (LOC100784045), transcript variant X2, mRNA	subtilisin-like protease SBT2.5(LOC100784045)	coding protein	psRNATarget
XM_003524192.3	ncRNA:21   AAGGGGAUGUUGAGGGAAACU   1   *||=||*=||||||||||||| targets:2336   AUCUCCAGCAACUCCCUUUGA   2356 Target Full Sequence	3.0	PREDICTED: Glycine max subtilisin-like protease SBT2.5 (LOC100784045), transcript variant X1, mRNA	subtilisin-like protease SBT2.5(LOC100784045)	coding protein	psRNATarget
XM_003532752.3	ncRNA:21   AAGGGGAUGUUGAGGGAAACU   1   *||=||*=||||||||||||| targets:2362   AUCUCCAGCAACUCCCUUUGA   2382 Target Full Sequence	3.0	PREDICTED: Glycine max subtilisin-like protease SBT2.5 (LOC100814065), mRNA	subtilisin-like protease SBT2.5(LOC100814065)	coding protein	psRNATarget
AF532629.1	ncRNA:21   AAGGGGAUGUUGAGGGAAACU   1   *|||=||*||||||||||||* targets:86   AUCCUCUUCAACUCCCUUUGC   106 Target Full Sequence	3.0	Glycine max alcohol dehydrogenase 1 mRNA, partial cds	NA	coding protein	psRNATarget
XM_003545616.3	ncRNA:21   AAGGGGAUGUUGAGGGAAACU   1   *|||=||*||||||||||||* targets:116   AUCCUCUUCAACUCCCUUUGC   136 Target Full Sequence	3.0	PREDICTED: Glycine max alcohol dehydrogenase 1 (LOC547658), mRNA	alcohol dehydrogenase 1(LOC547658)	coding protein	psRNATarget
NM_001255213.2	ncRNA:21   AAGGGGAUGUUGAGGGAAACU   1   *|||=||*||||||||||||* targets:186   AUCCUCUUCAACUCCCUUUGC   206 Target Full Sequence	3.0	Glycine max alcohol dehydrogenase 1-like (LOC100775490), mRNA	alcohol dehydrogenase 1-like(LOC100775490)	coding protein	psRNATarget
BT094393.1	ncRNA:21   AAGGGGAUGUUGAGGGAAACU   1   *|||=||*||||||||||||* targets:188   AUCCUCUUCAACUCCCUUUGC   208 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-24F8 unknown mRNA	NA	coding protein	psRNATarget

Reference

1	PMID:19353277 "Conserved and novel miRNAs in the legume Phaseolus vulgaris in response to stress"; Arenas-Huertero C, Perez B, Rabanal F, Blanco-Melo D, De la Rosa C, Estrada-Navarrete G, Sanchez F, Covarrubias AA, Reyes JL; Plant Mol Biol. 70:385-401(2009).