ncRNA ID | gma-miR159a-5p |
Species | Glycine max |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - GAGCUCCUUGAAGUCCAAUUG - NA |
Stem-loop(if miRNA) |
AAUU        UUAUGAA            GA       UU    AUCU    ----   UG   U     G     C      UC      UU     -  UCAAUA     AAAGGGGA       GUGGAGCUCCUU  AGUCCAA  GAGG    UACU    GGG  AAU GAGCU CUUAG UAUGGA  CCACAG  CUACC CA      A     ||||||||       ||||||||||||  |||||||  ||||    ||||    |||  ||| ||||| ||||| ||||||  ||||||  ||||| ||     UUUCUUCU       CAUCUCGAGGGA  UUAGGUU  UUCC    AUGA    UCC  UUA UUCGA GGGUU AUACCU  GGUGUU  GAUGG GU      G -UCU        CUUCCCA            AG       UC    AAUU    UAUU   GU   C     G     U      UC      CU     U  UUUCGU |
Stem-loop sequence | AAUUAAAGGGGAUUAUGAAGUGGAGCUCCUUGAAGUCCAAUUGAGGAUCUUACUGGGUGAAUUGAGCUGCUUAGCUAUGGAUCCCACAGUUCUACCCAUCAAUAAGUGCUUUUGUGGUAGUCUUGUGGCUUCCAUAUUUGGGGAGCUUCAUUUGCCUUUAUAGUAUUAACCUUCUUUGGAUUGAAGGGAGCUCUACACCCUUCUCUUCUUUUCU |
1 | PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008). |
2 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |