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BaseInfo

ncRNA ID gma-miR159a-5p
Species Glycine max
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - GAGCUCCUUGAAGUCCAAUUG - NA
Stem-loop(if miRNA) AAUU        UUAUGAA            GA       UU    AUCU    ----   UG   U     G     C      UC      UU     -  UCAAUA
    AAAGGGGA       GUGGAGCUCCUU  AGUCCAA  GAGG    UACU    GGG  AAU GAGCU CUUAG UAUGGA  CCACAG  CUACC CA      A
    ||||||||       ||||||||||||  |||||||  ||||    ||||    |||  ||| ||||| ||||| ||||||  ||||||  ||||| ||
    UUUCUUCU       CAUCUCGAGGGA  UUAGGUU  UUCC    AUGA    UCC  UUA UUCGA GGGUU AUACCU  GGUGUU  GAUGG GU      G
-UCU        CUUCCCA            AG       UC    AAUU    UAUU   GU   C     G     U      UC      CU     U  UUUCGU
Stem-loop sequence AAUUAAAGGGGAUUAUGAAGUGGAGCUCCUUGAAGUCCAAUUGAGGAUCUUACUGGGUGAAUUGAGCUGCUUAGCUAUGGAUCCCACAGUUCUACCCAUCAAUAAGUGCUUUUGUGGUAGUCUUGUGGCUUCCAUAUUUGGGGAGCUUCAUUUGCCUUUAUAGUAUUAACCUUCUUUGGAUUGAAGGGAGCUCUACACCCUUCUCUUCUUUUCU

Reference

1 PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots";
Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O;
BMC Genomics. 9:160(2008).
2 PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses";
Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R;
BMC Genomics. 12:307(2011).