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BaseInfo

ncRNA ID	gma-miR1508b
Species	Glycine max
Class	miRNA
Genome position	NA
Reference genome	NA
Source	miRBase
Length	21
Mature sequence(if miRNA)	NA - UAGAAAGGGGAAUAGCAGUUG - NA
Stem-loop(if miRNA)	AAUU                    A      A   -   UUACA         GCUAUUCAACUGCUAUUCCC UUUCUA ACC UUG     CGAGC     |||||||||||||||||||| |||||| ||| |||     ||||A     UGGUGAGUUGACGAUAAGGG AAAGAU UGG AAC     GUUCU UUCG                    G      C   U   ---UA
Stem-loop sequence	AAUUGCUAUUCAACUGCUAUUCCCAUUUCUAAACCUUGUUACACGAGCAUCUUGAUCAAUGGUCUAGAAAGGGGAAUAGCAGUUGAGUGGUGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170973.1	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   ||||||||||||||*|||||| targets:10   CAACUGCUAUUCCCAUUUCUA   30 Target Full Sequence	1.5	Sequence 8637 from Patent EP2559767	NA	coding protein	psRNATarget
HI410512.1	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   ||||||||||||||*|||||| targets:10   CAACUGCUAUUCCCAUUUCUA   30 Target Full Sequence	1.5	Sequence 8637 from Patent EP2074227	NA	coding protein	psRNATarget
JB171035.1	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   ||||||||||||||*|||||| targets:10   CAACUGCUAUUCCCAUUUCUA   30 Target Full Sequence	1.5	Sequence 8699 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242704.1	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   ||||||||||||||*|||||| targets:10   CAACUGCUAUUCCCAUUUCUA   30 Target Full Sequence	1.5	Sequence 8699 from Patent EP2985353	NA	coding protein	psRNATarget
HI410513.1	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   ||||||||||||||*|||||| targets:10   CAACUGCUAUUCCCAUUUCUA   30 Target Full Sequence	1.5	Sequence 8638 from Patent EP2074227	NA	coding protein	psRNATarget
HI410574.1	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   ||||||||||||||*|||||| targets:10   CAACUGCUAUUCCCAUUUCUA   30 Target Full Sequence	1.5	Sequence 8699 from Patent EP2074227	NA	coding protein	psRNATarget
JB170974.1	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   ||||||||||||||*|||||| targets:10   CAACUGCUAUUCCCAUUUCUA   30 Target Full Sequence	1.5	Sequence 8638 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242643.1	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   ||||||||||||||*|||||| targets:10   CAACUGCUAUUCCCAUUUCUA   30 Target Full Sequence	1.5	Sequence 8638 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242642.1	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   ||||||||||||||*|||||| targets:10   CAACUGCUAUUCCCAUUUCUA   30 Target Full Sequence	1.5	Sequence 8637 from Patent EP2985353	NA	coding protein	psRNATarget
XM_006599409.2	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   |*|||||*|||=||||||||| targets:372   CUACUGCCAUUUCCCUUUCUA   392 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like (LOC100813712), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like(LOC100813712)	coding protein	psRNATarget
XM_006599408.2	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   |*|||||*||||||||||=|| targets:388   CUACUGCCAUUCCCCUUUUUA   408 Target Full Sequence	2.5	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC100812093), transcript variant X1, mRNA	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial(LOC100812093)	coding protein	psRNATarget
XM_006587773.2	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   |*|||||*|||=||||||||| targets:404   CCACUGCCAUUUCCCUUUCUA   424 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like (LOC100778420), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like(LOC100778420)	coding protein	psRNATarget
XM_006587774.2	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   |*|||||*|||=||||||||| targets:404   CCACUGCCAUUUCCCUUUCUA   424 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like (LOC100778420), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like(LOC100778420)	coding protein	psRNATarget
XM_006599424.2	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   |*|||||*|||=||||||||| targets:252   CCACUGCCAUUUCCCUUUCUA   272 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like (LOC100818504), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like(LOC100818504)	coding protein	psRNATarget
XM_006599423.2	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   |*|||||*|||=||||||||| targets:252   CCACUGCCAUUUCCCUUUCUA   272 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like (LOC100818504), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like(LOC100818504)	coding protein	psRNATarget
XM_014769273.1	ncRNA:21   GUUGACGAUAAGGGGAAAGAU   1   =*|||||*|||=||||||||| targets:459   UUACUGCCAUUUCCCUUUCUA   479 Target Full Sequence	2.5	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC106796589), mRNA	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial(LOC106796589)	coding protein	psRNATarget

Reference

1	PMID:19084500 "Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules"; Wang Y, Li P, Cao X, Wang X, Zhang A, Li X; Biochem Biophys Res Commun. 378:799-803(2009).