| ncRNA ID | ath-miR5029 |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr5:12268507-12268697 [+] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 38 - AAUGAGAGAGAACACUGCAAA - 58 |
| Stem-loop(if miRNA) |
-A CUUAUGU AGA AAAU U -G GAGUAAUCGAUUCA GAAUGAG AUGAUGAUGCAU AACGAUCGGGAAUGAGAGAGAACACUGCAAAUUAG UCC UCAA GGAU GA G ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| |||| || UUUAUUU UACUAUUGCGUG UUGCUAGCCCUUACUCUCUCUUGUGACGUUUAAUU GGG AGUU CGAG UG C AG ------U --G -AAU A AA GUUAAUGCUAGGUU |
| Stem-loop sequence | GAAUGAGAAUGAUGAUGCAUCUUAUGUAACGAUCGGGAAUGAGAGAGAACACUGCAAAUUAGAGAUCCAAAUUCAAUGGAUGGAGAGUAAUCGAUUCAGCUUGGAUCGUAAUUGGUAAGAGCAUUGAUAAGGGGUUAAUUUGCAGUGUUCUCUCUCAUUCCCGAUCGUUUGUGCGUUAUCAUGAUUUAUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_001203451.1 |
|
2.5 | Arabidopsis thaliana neuroblastoma-amplified sequence protein mRNA | neuroblastoma-amplified sequence protein(AT5G24350) | coding protein | psRNATarget | |||||||||
| NM_001343876.1 |
|
2.5 | Arabidopsis thaliana neuroblastoma-amplified sequence protein mRNA | neuroblastoma-amplified sequence protein(AT5G24350) | coding protein | psRNATarget | |||||||||
| NM_122343.3 |
|
2.5 | Arabidopsis thaliana neuroblastoma-amplified sequence protein mRNA | neuroblastoma-amplified sequence protein(AT5G24350) | coding protein | psRNATarget |
| 1 | PMID:21357774
"MicroRNA activity in the Arabidopsis male germline"; Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD; J Exp Bot. 62:1611-1620(2011). |