Search result

BaseInfo

ncRNA ID gma-miR4392
Species Glycine max
Class miRNA
Genome position chr9:46771234-46771343 [+]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 84 - UCUGCGAAAAUGUGAUUUCGGA - 105
Stem-loop(if miRNA)    C       -             U      --  CA    ACA  AA    UUA
ACA UUCCGAG UCAUAUUUUCGCA AGAAAA  GC  CCGA   GG  CUUG   C
||| ||||||| ||||||||||||| ||||||  ||  ||||   ||  ||||
UGU AAGGCUU AGUGUAAAAGCGU UCUUUU  UG  GGCU   CU  GAAC   A
   C       U             C      UU  AA    -AG  AG    CAU
Stem-loop sequence ACACUUCCGAGUCAUAUUUUCGCAUAGAAAAGCCACCGAACAGGAACUUGUUACAUACCAAGGAUCGAUCGGAAGUUUUUUUCUCUGCGAAAAUGUGAUUUCGGAACUGU

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).