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BaseInfo

ncRNA ID gma-miR5774b
Species Glycine max
Class miRNA
Genome position chr9:46549349-46549505 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 127 - GCUGGCGUCGACACGUGGCAU - 147
Stem-loop(if miRNA) AA                                          ------   A        G    AGG   U   AGCU
  GAGUUUGGGCUGGCGUCGACACGUGGCAUGAGACUAGUCAGU      GGC AUUUGCAG UAGC   GCU CUC    U
  ||||||||||||||||||||||||||||||||||||||||||      ||| |||||||| ||||   ||| |||
  CUCAAACCCGACUGCAGCUGUGCACUGUACUCUGAUCGGUCA      CCG UAAACGUC AUUG   CGA GGG    U
UG                                          GGUUAA   C        -    GGA   U   ACUU
Stem-loop sequence AAGAGUUUGGGCUGGCGUCGACACGUGGCAUGAGACUAGUCAGUGGCAAUUUGCAGGUAGCAGGGCUUCUCAGCUUUUUCAGGGUAGCAGGGUUACUGCAAAUCGCCAAUUGGACUGGCUAGUCUCAUGUCACGUGUCGACGUCAGCCCAAACUCGU

Reference

1 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).