| ncRNA ID | gma-miR168a |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr9:41353226-41353350 [-] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 87 - UCGCUUGGUGCAGGUCGGGAA - 107 |
| Stem-loop(if miRNA) |
--- GU UA C U A UC - --AA GA CACU GCGGUCUC AUUCG UUGGUGCAGG CGGGA CCGGUUU GCGC GG UG G |||| |||||||| ||||| |||||||||| ||||| ||||||| |||| || || GUGG CGCCGGAG UAAGU AACUACGUUC GCCCU GGUUAAG CGCG CC GC G CAA -- GC C C A -C G GCUG GA |
| Stem-loop sequence | CACUGUGCGGUCUCUAAUUCGCUUGGUGCAGGUCGGGAACCGGUUUUCGCGCGGAAUGGAGGAGCGGUCGCCGGCGCCGAAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAGGCCGCGGUGAAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK286252.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-24-N15 | NA | coding protein | psRNATarget | |||||||||
| XM_003548263.3 |
|
2.5 | PREDICTED: Glycine max protein argonaute 1-like (LOC100778754), mRNA | protein argonaute 1-like(LOC100778754) | coding protein | psRNATarget | |||||||||
| XM_003534036.3 |
|
2.5 | PREDICTED: Glycine max protein argonaute 1 (LOC100780375), transcript variant X1, mRNA | protein argonaute 1(LOC100780375) | coding protein | psRNATarget |
| 1 | PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008). |
| 2 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |