ncRNA ID | gma-miR4354 |
Species | Glycine max |
Class | miRNA |
Genome position | chr9:39346879-39347028 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 126 - CAAUUGGAUCGGUCCAACCGGC - 147 |
Stem-loop(if miRNA) |
       A   A     C      C      C          - C      ----------GUU    CAAGUCAUCUCG UUGGUCG GUU GACCG UCCAAU GGGAUC GGUGACCUAA C GGUCGA             UGAC            A ||||||| ||| ||||| |||||| |||||| |||||||||| | ||||||             |||| AGCCGGC CAA CUGGC AGGUUA CCCUAG CCACUGGAUU G CUAGCU             AGCC            G        -   C     U      A      A          A U      AAUAUGAUAAUCU    AGUGCAUUAUCU |
Stem-loop sequence | UUGGUCGAGUUAGACCGCUCCAAUCGGGAUCCGGUGACCUAACCGGUCGAGUUUGACCAAGUCAUCUCGAGUCUAUUACGUGACCGAUCUAAUAGUAUAAUCGAUCUGAUUAGGUCACCAGAUCCCAAUUGGAUCGGUCCAACCGGCCGA |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |