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BaseInfo

ncRNA ID gma-miR4354
Species Glycine max
Class miRNA
Genome position chr9:39346879-39347028 [+]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 126 - CAAUUGGAUCGGUCCAACCGGC - 147
Stem-loop(if miRNA)        A   A     C      C      C          - C      ----------GUU    CAAGUCAUCUCG
UUGGUCG GUU GACCG UCCAAU GGGAUC GGUGACCUAA C GGUCGA             UGAC            A
||||||| ||| ||||| |||||| |||||| |||||||||| | ||||||             ||||
AGCCGGC CAA CUGGC AGGUUA CCCUAG CCACUGGAUU G CUAGCU             AGCC            G
       -   C     U      A      A          A U      AAUAUGAUAAUCU    AGUGCAUUAUCU
Stem-loop sequence UUGGUCGAGUUAGACCGCUCCAAUCGGGAUCCGGUGACCUAACCGGUCGAGUUUGACCAAGUCAUCUCGAGUCUAUUACGUGACCGAUCUAAUAGUAUAAUCGAUCUGAUUAGGUCACCAGAUCCCAAUUGGAUCGGUCCAACCGGCCGA

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).