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BaseInfo

ncRNA ID gma-miR169h
Species Glycine max
Class miRNA
Genome position chr9:5282119-5282269 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 61 - GGCGAGACAUCUUGGCUCAUU - 81
Stem-loop(if miRNA) --------------- UG - UU  --   ---    G   ACUUGCCGGCGUAUGUUUGAUCUCUUCUAGGACUGUUGCCGGCGAG
               G  C U  UG  AGC   CAAG AUG                                              A
               |  | |  ||  |||   |||| |||                                              C
               A  G A  GG  AGU   UUCG AGA                                              A
GUGUUAAUAACCUGU -- U --  AA   UAG    -   AAGAUCUCAGAGUAUACUCACCUUUCUCUCGUGGUUACUCGGUUCU
Stem-loop sequence GUGCUUUUGAGCCAAGGAUGACUUGCCGGCGUAUGUUUGAUCUCUUCUAGGACUGUUGCCGGCGAGACAUCUUGGCUCAUUGGUGCUCUCUUUCCACUCAUAUGAGACUCUAGAAAGAGCUUGAUUGAAAGGAUGAUGUCCAAUAAUUGUG

Reference

1 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).