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BaseInfo

ncRNA ID gma-miR5784
Species Glycine max
Class miRNA
Genome position chr8:30116879-30116988 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 80 - AAUUAGCUAAUGGUUAGCUAA - 100
Stem-loop(if miRNA) AAAC                           U   AAU  CA      UUUUU  A
    UCUUCAUUAGCUAAUCAUUAGCUAAUU GUA   GU  UCUCAU     AG A
    ||||||||||||||||||||||||||| |||   ||  ||||||     || A
    AGAAGUAAUCGAUUGGUAAUCGAUUAA CAU   CG  AGAGUA     UC A
CUCA                           U   CUU  --      ---UU  G
Stem-loop sequence AAACUCUUCAUUAGCUAAUCAUUAGCUAAUUUGUAAAUGUCAUCUCAUUUUUUAGAAAAGCUUUAUGAGAGCUUCUACUAAUUAGCUAAUGGUUAGCUAAUGAAGAACUC

Reference

1 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).