| ncRNA ID | gma-miR4408 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr8:28229373-28229513 [+] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 102 - UAACAACAUUGGAUGAGGGUUGGA - 125 |
| Stem-loop(if miRNA) |
C C C A U A A C A U CU CAAU GGAAU UUUCUUCCAACCU CAUCCAAUGUUGUUAAA GACC UUAU G GCC CCAU AUG A |||| ||||| ||||||||||||| ||||||||||||||||| |||| |||| | ||| |||| ||| GUUA CUUUA AAAGAAGGUUGGG GUAGGUUACAACAAUUU UUGG AAUA C CGG GGUA UAC G - A U A U A C A C U AA |
| Stem-loop sequence | CCAAUCGGAAUCUUUCUUCCAACCUACAUCCAAUGUUGUUAAAUGACCAUUAUAGCGCCACCAUUAUGCUAGAACAUUAUGGCGGCACCAUAAAGGUUUUUUAACAACAUUGGAUGAGGGUUGGAAGAAAUAUUUCAAUUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_003520027.3 |
|
3.0 | PREDICTED: Glycine max protein PHYTOCHROME KINASE SUBSTRATE 2-like (LOC100783459), mRNA | protein PHYTOCHROME KINASE SUBSTRATE 2-like(LOC100783459) | coding protein | psRNATarget |
| 1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |
| 2 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |