ncRNA ID | gma-miR5679 |
Species | Glycine max |
Class | miRNA |
Genome position | chr8:25784368-25784446 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 11 - UUGGUGACCCAGAAGAAGUUGA - 32 |
Stem-loop(if miRNA) |
CGAUGACC          UGAU        G AU     A         CUUCAAUUUU    UUCUGGGU G  GACCC A         ||||||||||    |||||||| |  ||||| C         GGAGUUGAAG    AAGACCCA U  UUGGG C UUUCUCAA          ----        G GG     U |
Stem-loop sequence | CGAUGACCCUUCAAUUUUUGAUUUCUGGGUGGAUGACCCAACCUGGGUUGGUGACCCAGAAGAAGUUGAGGAACUCUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014763572.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC106795040 (LOC106795040), mRNA | uncharacterized LOC106795040(LOC106795040) | coding protein | psRNATarget | |||||||||
XM_014775525.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC106798717 (LOC106798717), mRNA | uncharacterized LOC106798717(LOC106798717) | coding protein | psRNATarget |
1 | PMID:21219599
"Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing"; Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS; BMC Plant Biol. 11:5(2011). |