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BaseInfo

ncRNA ID gma-miR5679
Species Glycine max
Class miRNA
Genome position chr8:25784368-25784446 [-]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 11 - UUGGUGACCCAGAAGAAGUUGA - 32
Stem-loop(if miRNA) CGAUGACC          UGAU        G AU     A
        CUUCAAUUUU    UUCUGGGU G  GACCC A
        ||||||||||    |||||||| |  ||||| C
        GGAGUUGAAG    AAGACCCA U  UUGGG C
UUUCUCAA          ----        G GG     U
Stem-loop sequence CGAUGACCCUUCAAUUUUUGAUUUCUGGGUGGAUGACCCAACCUGGGUUGGUGACCCAGAAGAAGUUGAGGAACUCUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763572.1
ncRNA:22   AGUUGAAGAAGACCCAGUGGUU   1
  ||*||*||||||||||||||||
targets:146   UCUACCUCUUCUGGGUCACCAA   167

1.0 PREDICTED: Glycine max uncharacterized LOC106795040 (LOC106795040), mRNA uncharacterized LOC106795040(LOC106795040) coding protein psRNATarget
XM_014775525.1
ncRNA:22   AGUUGAAGAAGACCCAGUGGUU   1
  ||*||*||||||||||||||||
targets:153   UCUACCUCUUCUGGGUCACCAA   174

1.0 PREDICTED: Glycine max uncharacterized LOC106798717 (LOC106798717), mRNA uncharacterized LOC106798717(LOC106798717) coding protein psRNATarget

Reference

1 PMID:21219599
"Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing";
Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS;
BMC Plant Biol. 11:5(2011).