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BaseInfo

ncRNA ID gma-miR398c
Species Glycine max
Class miRNA
Genome position chr8:14299247-14299356 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - UGUGUUCUCAGGUCGCCCCUG - 31
Stem-loop(if miRNA) ----U    -     U  U       U       A  --       --------      CC
     UCUA CAGGG CG CCUGAGA CACAUGA GU  AGAAUAU        AAGCAG  A
     |||| ||||| || ||||||| ||||||| ||  |||||||        ||||||
     AGGU GUCCC GC GGACUCU GUGUACU CG  UCUUGUG        UUCGUU  U
UUAUC    C     C  U       U       -  AC       CUCUGUUC      UA
Stem-loop sequence UUCUACAGGGUCGUCCUGAGAUCACAUGAAGUAGAAUAUAAGCAGCCAUAUUUGCUUCUUGUCUCGUGUUCUCAGCUCAUGUGUUCUCAGGUCGCCCCUGCUGGACUAUU

Reference

1 PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean";
Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL;
J Exp Bot. 62:2495-2506(2011).
2 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).