ncRNA ID | gma-miR398c |
Species | Glycine max |
Class | miRNA |
Genome position | chr8:14299247-14299356 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - UGUGUUCUCAGGUCGCCCCUG - 31 |
Stem-loop(if miRNA) |
----U    -     U  U       U       A  --       --------      CC      UCUA CAGGG CG CCUGAGA CACAUGA GU  AGAAUAU        AAGCAG  A      |||| ||||| || ||||||| ||||||| ||  |||||||        ||||||      AGGU GUCCC GC GGACUCU GUGUACU CG  UCUUGUG        UUCGUU  U UUAUC    C     C  U       U       -  AC       CUCUGUUC      UA |
Stem-loop sequence | UUCUACAGGGUCGUCCUGAGAUCACAUGAAGUAGAAUAUAAGCAGCCAUAUUUGCUUCUUGUCUCGUGUUCUCAGCUCAUGUGUUCUCAGGUCGCCCCUGCUGGACUAUU |
1 | PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean"; Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL; J Exp Bot. 62:2495-2506(2011). |
2 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |