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BaseInfo

ncRNA ID	gma-miR9746h
Species	Glycine max
Class	miRNA
Genome position	chr8:11852967-11853438 [-]
Reference genome	v1.0
Source	miRBase
Length	24
Mature sequence(if miRNA)	6 - AAAGUGUUUGAAUCUCAAUUAGAU - 29
Stem-loop(if miRNA)	ACA   C  C                       A     C          ---GUUUU     A  A                  -     C   A            U  UU               ----    AGCUGAGAAGUUAUUUUUGGUCAGAUUUAAAGCAACUUAACUACAUAUGUCACCUUAAAACAGAACAGUACUCAUCUAUUGCUAUUACUAUUGCGGUGCAACA    GUU UC AAUUGAGAUUCAAGCACUUUUCU UGUGG UUUAAGGUGU        AUUGC UG GCAAGAUGUUGAAUGCAG GGAUU AUA AACAAAUUGUCA AC  UUGCAUGCCUUAAGU    UCUC                                                                                                       A    ||| || ||||||||||||||||||||||| ||||| ||||||||||        ||||| || |||||||||||||||||| ||||| ||| |||||||||||| ||  |||||||||||||||    ||||                                                                                                       A    CAA AG UUAACUCUAAGUUUGUGAAAAGA GUACC AAAUUCCACA        UAACG AU CGUUUUACAACUUACGUU CUUAA UAU UUGUUUAACAGU UG  AACGUACGGAAUUCG    GAUA                                                                                                       U -AC   U  A                       A     U          AGGUACGU     A  C                  A     U   C            U  UU               AUUU    AAAACCAACCUAAGCUUUGUUGAAUUGGUGAAUAUAACGAAGUUUUAUCUUCUCAUGAGUUUAUGAUAUGUGUUGUUCAAAUUACAGUAAGAAGAUUGUAAUU
Stem-loop sequence	ACAGUUCUCCAAUUGAGAUUCAAGCACUUUUCUAUGUGGCUUUAAGGUGUGUUUUAUUGCAUGAGCAAGAUGUUGAAUGCAGGGAUUCAUAAAACAAAUUGUCAUACUUUUGCAUGCCUUAAGUUCUCAGCUGAGAAGUUAUUUUUGGUCAGAUUUAAAGCAACUUAACUACAUAUGUCACCUUAAAACAGAACAGUACUCAUCUAUUGCUAUUACUAUUGCGGUGCAACAAAUUUAAUGUUAGAAGAAUGACAUUAAACUUGUUGUGUAUAGUAUUUGAGUACUCUUCUAUUUUGAAGCAAUAUAAGUGGUUAAGUUGUUUCGAAUCCAACCAAAAAUAGUUUAGCUUAAGGCAUGCAAUUGUUUGACAAUUUGUUCUAUUAAUUCAUUGCAUUCAACAUUUUGCCUAAGCAAUUGCAUGGAACACCUUAAAUCCAUGAAGAAAAGUGUUUGAAUCUCAAUUAGAUAACCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006591064.2	ncRNA:21   AAGUAGAAGAAGGGAGAUAAU   1   *|*|||||||||||||||||= targets:22   CUAAUCUUCUUCCCUCUAUUG   42 Target Full Sequence	2.0	PREDICTED: Glycine max ruBisCO large subunit-binding protein subunit alpha (LOC100806471), transcript variant X1, mRNA	ruBisCO large subunit-binding protein subunit alpha(LOC100806471)	coding protein	psRNATarget
XM_006573741.2	ncRNA:21   AAGUAGAAGAAGGGAGAUAAU   1   ||||||||||||||||*|||* targets:223   UUCAUCUUCUUCCCUCCAUUC   243 Target Full Sequence	2.5	PREDICTED: Glycine max protein SEH1-like (LOC100812825), transcript variant X2, mRNA	protein SEH1-like(LOC100812825)	coding protein	psRNATarget
XM_003517451.3	ncRNA:21   AAGUAGAAGAAGGGAGAUAAU   1   ||||||||||||||||*|||* targets:221   UUCAUCUUCUUCCCUCCAUUC   241 Target Full Sequence	2.5	PREDICTED: Glycine max protein SEH1-like (LOC100812825), transcript variant X1, mRNA	protein SEH1-like(LOC100812825)	coding protein	psRNATarget

Reference

1	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).