ncRNA ID | gma-miR1528 |
Species | Glycine max |
Class | miRNA |
Genome position | chr8:4497394-4497658 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 233 - AUAGAUUAGAUCAAUAUAUUAGU - 255 |
Stem-loop(if miRNA) |
U A   U                 U                 UUAGACCAA   GAGAGUCAGUUUUUAUUGGAUUAAUCUGUCAUAUCUCAAAUUUUAUUUCAUUUAAGAACAAAAUAUAAUGUUAUGUUUGUAA  G UUG UGAAUAGAUUAGAUCAA AUAUUAGUAAGUUUUUA         GAU                                                                                  C  | ||| ||||||||||||||||| |||||||||||||||||         |||  C AAC ACUUAUCUAAUCUAGUU UAUAGUUAUUCAAAGAU         AAC                                                                                  U A C   C                 U                 ---------   CUGAUUAAACAAUAUGGGUUUUAAAAUAAAAUAAAUUUCUAUUUUAUAUUAAAUUAAAAGUAGAAGAGGAACUAAAAAAUUA |
Stem-loop sequence | UGAUUGUUGAAUAGAUUAGAUCAAUAUAUUAGUAAGUUUUUAUUAGACCAAGAUGAGAGUCAGUUUUUAUUGGAUUAAUCUGUCAUAUCUCAAAUUUUAUUUCAUUUAAGAACAAAAUAUAAUGUUAUGUUUGUAACUAUUAAAAAAUCAAGGAGAAGAUGAAAAUUAAAUUAUAUUUUAUCUUUAAAUAAAAUAAAAUUUUGGGUAUAACAAAUUAGUCCAAUAGAAACUUAUUGAUAUUUUGAUCUAAUCUAUUCACCAACCA |
1 | PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008). |