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BaseInfo

ncRNA ID gma-miR1528
Species Glycine max
Class miRNA
Genome position chr8:4497394-4497658 [-]
Reference genome v1.0
Source miRBase
Length 23
Mature sequence(if miRNA) 233 - AUAGAUUAGAUCAAUAUAUUAGU - 255
Stem-loop(if miRNA) U A   U                 U                 UUAGACCAA   GAGAGUCAGUUUUUAUUGGAUUAAUCUGUCAUAUCUCAAAUUUUAUUUCAUUUAAGAACAAAAUAUAAUGUUAUGUUUGUAA
 G UUG UGAAUAGAUUAGAUCAA AUAUUAGUAAGUUUUUA         GAU                                                                                  C
 | ||| ||||||||||||||||| |||||||||||||||||         |||
 C AAC ACUUAUCUAAUCUAGUU UAUAGUUAUUCAAAGAU         AAC                                                                                  U
A C   C                 U                 ---------   CUGAUUAAACAAUAUGGGUUUUAAAAUAAAAUAAAUUUCUAUUUUAUAUUAAAUUAAAAGUAGAAGAGGAACUAAAAAAUUA
Stem-loop sequence UGAUUGUUGAAUAGAUUAGAUCAAUAUAUUAGUAAGUUUUUAUUAGACCAAGAUGAGAGUCAGUUUUUAUUGGAUUAAUCUGUCAUAUCUCAAAUUUUAUUUCAUUUAAGAACAAAAUAUAAUGUUAUGUUUGUAACUAUUAAAAAAUCAAGGAGAAGAUGAAAAUUAAAUUAUAUUUUAUCUUUAAAUAAAAUAAAAUUUUGGGUAUAACAAAUUAGUCCAAUAGAAACUUAUUGAUAUUUUGAUCUAAUCUAUUCACCAACCA

Reference

1 PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots";
Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O;
BMC Genomics. 9:160(2008).