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BaseInfo

ncRNA ID gma-miR5036
Species Glycine max
Class miRNA
Genome position chr8:1771394-1771544 [+]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 61 - AGAGGCCCUUGGGGAGGAGUAA - 82
Stem-loop(if miRNA) ----   GG UGAUUGUUCACUCUCCCUCAAGGGCUUCUCGCUUUAACAUCCAAGAACAAGACUAGAGGCCCUUGGG
    AGG  U                                                                   G
    |||  |                                                                   A
    CUU  C                                                                   G
AAUA   -- CACUCUUUGUUCUACUUGAAGAAACACAAUAUAUAUAUAUAUAUAUAUUCCUUGUCGAAUAAAUGAG
Stem-loop sequence AGGGGUUGAUUGUUCACUCUCCCUCAAGGGCUUCUCGCUUUAACAUCCAAGAACAAGACUAGAGGCCCUUGGGGAGGAGUAAAUAAGCUGUUCCUUAUAUAUAUAUAUAUAUAUAACACAAAGAAGUUCAUCUUGUUUCUCACCUUCAUAA

Reference

1 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).