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BaseInfo

ncRNA ID gma-miR1513a-3p
Species Glycine max
Class miRNA
Genome position chr7:43245809-43245901 [+]
Reference genome v1.0
Source miRBase
Length 23
Mature sequence(if miRNA) 52 - UUUAAAUGUGUAUAAGUCAUGGU - 74
Stem-loop(if miRNA)     C                         C     CA       C
GGAU AGAUAUGAGAGAAAGCCAUGACUUA ACACA  UUGAAAU U
|||| ||||||||||||||||||||||||| |||||  |||||||
CCUA UCUAUACUCUCUUUUGGUACUGAAU UGUGU  AAUUUUG U
    A                         A     -A       A
Stem-loop sequence GGAUCAGAUAUGAGAGAAAGCCAUGACUUACACACACAUUGAAAUCUUAGUUUUAAAUGUGUAUAAGUCAUGGUUUUCUCUCAUAUCUAAUCC

Reference

1 PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots";
Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O;
BMC Genomics. 9:160(2008).
2 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).