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BaseInfo

ncRNA ID novel_osa_miR10749
Species Oryza sativa
Class miRNA
Genome position Chr6:25754343-25754400 [+]
Reference genome IRGSP-1.0
Source SRR4407777
Length 24
Mature sequence(if miRNA) 35 - AGGUCGAGUUAUUUUGGGACGGAG - 58
Stem-loop(if miRNA) --  A           A UA     U  C
  CC UCCCAAAAUAA U  ACCUG GA C
  || ||||||||||| |  ||||| || C
  GG AGGGUUUUAUU A  UGGAU CU A
GA  C           G GC     -  U
Stem-loop sequence CCAUCCCAAAAUAAAUUAACCUGUGACCCAUUCUAGGUCGAGUUAUUUUGGGACGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015788811.1
ncRNA:24   GAGGCAGGGUUUUAUUGAGCUGGA   1
  ||||||||=||||||||||*||||
targets:931   CUCCGUCCUAAAAUAACUCAACCU   954

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277009 (LOC107277009), transcript variant X1, mRNA uncharacterized LOC107277009(LOC107277009) coding protein psRNATarget